This document contains code workflows, explaining how to perform the bioinformatics analysis described in Single-cell transcriptomic analysis of endometriosis
A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlights cell populations characteristic of these tissue types. Transcriptional and cellular heterogeneity across tissues suggests novel therapeutic targets and biomarkers for this disease.
Processed files used in the figures can be download from the following link: Seurat object files Primary sequencing data are available through the Gene Expression Omnibus under accession no. GSE213216 GEO id, patient and class GEO ids table